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BMB Weekly #25: June 23, 2023

Vol. 56, No.25Horizontal banner with MSU helmet displaying College of Natural Science Department of Biochemistry and Molecular Biology


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Noteworthy News


Congratulations to the 2023 BMB Undergraduate Research and Arts Forum (UURAF) First Place Award Winners!

Poster Presentation
Student Presenter: Dayna Olson 
Mentor: Josh Vermaas 
Title: Lipid Specificity of the Drought Stress Signaling Protein PLAFP 

Poster Presentation
Student Presenter: Roksana Riddle 
Mentors: Daniel Ducat, Michaela TerAvest, Masako Harada, Bjoern Hamberger 
Title: Modifying Pseudomonas Syringae Phage as a Model for Plant Pathogen Biocontrol 

Poster Presentation
Student Presenter: Tuan "Kiet" Trinh 
Mentor: Hyojin Kim 
Title: Structural and Biochemical Analysis of SGT2-GET 4/5 Complex That Plays a Critical Role in Tail-Anchored Protein Biogenesis

Poster Presentation
Student Presenters: Sunyoung You, Sejla Sinanovic 
Mentor: Jiying Ling 
Title: FirstStep2Health: Effects on Reducing Parents' Perceived Stress and Improving Coping

Poster Presentation
Student Presenter: Ram Sanath Kumar 
Mentors: Christopher Waters, Kaylee Wilburn 
Title: Identifying CBASS Phage Defense Activation in Vibrio cholerae El Tor

Oral Presentation
Student Presenters: Michael Ngatio, Isabella Rodrigues 
Mentor: Jinxing Li 
Title: Application of Hydrogels to Treat Deep Vein Thrombosis and Pulmonary Embolism 

Oral Presentation
Student Presenter: Harrison Nabors 
Mentor: Dohun Pyeon 
Title: Characterization of CDKN2A/p76 as a Tumor-Specific Promoter 

 

 

 

Upcoming Seminars


Coming Soon: Fall Colloquium Series

The speaker list for the Fall 2023 BMB Colloquium Series will be available soon.

 

Mark Your Calendar


Pizza Talk Series

June 27, 2023 — 12:00 p.m.
BCH Garden
Audience: Current Graduate Students

Joshua Kaste and Nick Schlecht will talk about their research, plans for future research, and/or journal article of interest, with plenty of time for questions and answers. Please join us for pizza and drinks, and a chance to hear what your peers are up to. We will meet outside at the picnic tables in the garden, or BCH 208 if inclement weather.


ETD Formatting Walk-In Help
June 27, 2023 — 1:30 p.m.–3:00 p.m.
Chittenden Hall, Room 220
Audience: Master's Plan A and Doctoral Students

Do you have questions regarding formatting your thesis or dissertation? Stop in during one of our help sessions to talk to Graduate School staff about any specific formatting questions you may have. These are walk-in sessions. No registration is required. Learn more here.


Postdoc Academy Learning Sessions (PALS)
June 29, 2023 — 4:00 p.m.–5:00 p.m.
Chittenden Hall, Room 110
Audience: Postdocs, Graduate Students, Faculty

Are you registered for the Postdoc Academy's course, "The Postdoc Academy: Building Skills for a Successful Career" through the edX platform? If so, Drs. Rique Campa and Tony Nunez from the Graduate School are hosting weekly Postdoc Academy Learning Sessions (PALS) to help all participants (e.g., postdocs, senior graduate students, early career faculty, etc) navigate the course and discuss course content with the goal of assisting participants complete the 7-week Massive Open Online Course (MOOC). No registration or fee is required.


Mid-SURE Graduate School Fair
STEM Teaching and Learning Facility
Registration Deadline: Early July
Program Date: July 26, 2023 — 8:30 a.m.–4:30 p.m.
Audience: Postdocs, Graduate Students, Faculty

Recruiters from graduate programs are invited to attend the graduate recruitment fair at the Mid-Michigan Symposium for Undergraduate Research Experiences (Mid-SURE). Mid-SURE is an opportunity for undergraduates involved in research and creative activities to share their work with their peers, faculty, and external audiences. The recruitment fair will run concurrently with Mid-SURE presentations. Learn more and register here.


ETD Formatting Workshop
July 13, 2023 — 9:30 a.m.–11:00 a.m.
Attention: Graduate Students, Faculty

This webinar is designed for Plan A Master’s students and all Doctoral students who intend to graduate this semester. During this workshop students will receive information regarding the following:

  • How to format their thesis or dissertation correctly
  • How to successfully submit their thesis or dissertation via ProQuest
  • How to successfully submit required paperwork, complete their Graduate School degree requirements, and receive their diploma

Registration is required. Learn more here.


Annual Conference of the Phytochemical Society of North America (PSNA) 2023
July 16–20, 2023
Attention: Graduate Students, Faculty

Join us in the heart of Michigan, East Lansing for the 62nd annual meeting of the Phytochemical Society of North America (PSNA) at Michigan State University. The meeting will be held at the Kellogg Conference Center on July 16-20, 2023. This long-standing conference brings together researchers with interest in the chemistry and biochemistry of plant natural products, their Synthetic Biology and their effects on plant and animal physiology and pathology, and their agricultural, pharmacological, and industrial utilization. Learn more and register here

 

Awards, Grants and Fellowships


STEAMpower Graduate Fellows and Faculty/Staff-Led Teams   
Application Deadline: August 22, 2023
Attention: MFA and Doctoral Students

The STEAMpower Project is looking for graduate student fellows and faculty/staff-led teams that are interested in exploring the intersection of STEM and the arts/humanities. The theme for this year’s projects is sustainability. Graduate Fellows will earn $4,000 for participation during the academic year 2023-24, and Faculty/Staff-led Teams can access up to $20,000 for their interdisciplinary project over 2023-24. Learn more and apply here

 

Announcements


Free Thermocyclers!

Two PCR thermocyclers in working condition available for free. Contact Neil Bowlby (bowlby@msu.edu) for more information.


Welcome Information for International Graduate Students
Attention: Graduate Program Directors

International graduate students for the upcoming Fall 2023 semester will need to complete various tasks and attend events prior to the start of the semester. A list of these action items can be found here.


Summer Assistance at the Stoneleigh Hospice House
Attention: Graduate Students

Graduate students interested in volunteering this summer can apply to assist in the Stoneleigh Hospice House. Volunteer positions at Stoneleigh Residence include working with patients and families. There are also opportunities to help with non-patient care such as lawn and garden care, light housekeeping, maintenance, and other duties. Learn more and apply to volunteer here.


Fall 2023 ITA Support Classes - Advising Appointments and Registration Available
Now
Attention: International Teaching Assistants, GPDs, GPAs

The ITA Program is currently scheduling advising appointments for international graduate teaching assistants interested in taking ITA support courses in Fall 2023. Learn more here.


COVID-19 Guidance for International Travel
Attention: Staff, Faculty, Research Associates, and Graduate Students

To help field questions, Global Safety has developed a guide with recommended steps and resources. This is available as a PDF and on the Global Safety website at www.globalsafety.msu.edu/positive-COVID-19. The first step is to call ISOS for guidance.

 

Job Postings


Research Associate, Fixed Term — Kaguni Lab   New!

The research associate will conduct research to determine the cryo-electron microscopic structure of a protein-DNA complex formed in the process of replication initiation using Escherichia coli as a model system. The individual will also obtain training in nucleic acid enzymology and molecular genetics. Learn more about this MSU Careers posting and apply at this link.


Research Associate, Fixed Term — Quinn Lab

This project involves study of the metabolome and microbiome of corals in Hawaii, USA during their response to thermal stress. The scholar will work on both live coral in Kaneohe Bay, Hawaii, and controlled biochemical and microbiological studies of their symbiotic algae at MSU. The project involves complex analysis of metabolomics data coupled with molecular biology and genetic manipulation of culturable marine algae. Skills required for the position are broad and include mass spectrometry, microbiology, molecular biology and genetic techniques, as well as marine biology and field sampling experience. Learn more about this MSU Careers posting and apply at this link.


Research Associate, Fixed Term — Vo Lab

One research associate (post-doc) position is available in the lab of Dr. Tommy Vo. This research position is to develop new biochemical methods for high-throughput in vivo mapping of localized protein interactomes in the fission yeast S. pombe. The work will employ genetic, genomic, molecular, microscopic and biochemical approaches to understand how proteins engage with different complexes within the cell. Overall, the associate can expect to develop excellence in three key areas: research, mentoring, and scientific communication. Learn more about this MSU Careers posting and apply at this link.


Research Associate, Fixed Term
  He Lab

The successful candidate will have a solid background in cellular/molecular biology and developmental biology. Experience in neurobiology, disease mouse models, mouse behavioral analysis, and/or high-throughput sequencing experiments and bioinformatics analyses are a plus. Duties include: maintain mouse colonies, perform mouse behavioral analysis, perform mouse genetic analysis, histological analysis, and molecular analysis, collect data and analyze data, and write manuscripts. Learn more about this MSU Careers posting and apply at this link.

 

Recent Publications

Doherty, J. H., Cerchiara, J. A., Scott, E. E., Jescovitch, L. N., McFarland, J. L., Haudek, K. C., & Wenderoth, M. P. (2023). Oaks to
         arteries: the Physiology Core Concept of flow down gradients supports transfer of student reasoning. Advances in physiology
         education
47(2), 282–295. https://doi.org/10.1152/advan.00155.2022

Doherty, J. H., Scott, E. E., Cerchiara, J. A., Jescovitch, L. N., McFarland, J. L., Haudek, K. C., & Wenderoth, M. P. (2023). What a
         Difference in Pressure Makes! A Framework Describing Undergraduate Students' Reasoning about Bulk Flow Down Pressure
         Gradients. CBE life sciences education22(2), ar23. https://doi.org/10.1187/cbe.20-01-0003

Feng, H., Jiang, J., & Wei, G. W. (2023). Machine-learning repurposing of DrugBank compounds for opioid use disorder. Computers
         in biology and medicine
160, 106921. https://doi.org/10.1016/j.compbiomed.2023.106921

Kulke, M., Weraduwage, S. M., Sharkey, T. D., & Vermaas, J. V. (2023). Nanoscale simulation of the thylakoid membrane response to
         extreme temperatures. Plant, cell & environment, 10.1111/pce.14609. Advance online publication. https://doi.org/10.1111/pce.14609

Lanier, E. R., Andersen, T. B., & Hamberger, B. (2023). Plant terpene specialized metabolism: complex networks or simple linear
         pathways?. The Plant journal : for cell and molecular biology114(5), 1178–1201. https://doi.org/10.1111/tpj.16177

McClain, A. M., & Sharkey, T. D. (2023). Rapid CO2 changes cause oscillations in photosynthesis that implicate PSI acceptor-side
         limitations. Journal of experimental botany74(10), 3163–3173. https://doi.org/10.1093/jxb/erad084

Nynca, A., Swigonska, S., Ruszkowska, M., Sadowska, A., Orlowska, K., Molcan, T., Myszczynski, K., Otrocka-Domagala, I., Paździor-
         Czapula, K., Kurowicka, B., Petroff, B. K., & Ciereszko, R. E. (2023). Tamoxifen decreases ovarian toxicity without compromising
         cancer treatment in a rat model of mammary cancer. BMC genomics24(1), 325. https://doi.org/10.1186/s12864-023-09423-0

Schmiege, S. C., Sharkey, T. D., Walker, B., Hammer, J., & Way, D. A. (2023). Laisk measurements in the non-steady-state: tests in
         plants exposed to warming and variable CO2 concentrations. Plant physiology, kiad305. Advance online publication.
         https://doi.org/10.1093/plphys/kiad305

Takahashi, H., Marsolais, F., Cuypers, A., & Kopriva, S. (2023). Sulfur metabolism: actions for plant resilience and environmental
         adaptation. Journal of experimental botany74(11), 3271–3275. https://doi.org/10.1093/jxb/erad164

Voss, P. G., & Wang, J. L. (2023). Liquid-liquid phase separation: Galectin-3 in nuclear speckles and ribonucleoprotein complexes. 
         Experimental cell research427(1), 113571. https://doi.org/10.1016/j.yexcr.2023.113571

 

 


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College of Natural Science | BMB Weekly | Vol. 56, No.25