BMB Weekly #37: September 15, 2023
Vol. 56, No.37
Welcome Olorunseun Ogunwobi! BMB welcomes Olorunseun "Seun" Ogunwobi as Chairperson.
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Upcoming Seminars
Fall Colloquium Series: Sophia Lunt
Sophia Lunt from Michigan State University will be presenting "Cancer metabolism & photodynamic therapy"
To join us on Zoom, click this link. Password: bmbseminar
The Fall BMB Seminar Series will run through December 7, 2023. The complete schedule is available on the BMB Fall Seminar Series website. If you are interested in meeting with any of these speakers please email Leslie Williams, glady@msu.edu. Many speakers are planning to visit in-person. A zoom option will continue to be offered for all seminars.
Mark Your Calendar
Luncheon with Molecular Plant Sciences Speaker Xin Wang
Join us for MPS speaker Xin Wang from University of Florida. The seminar will be held at 4:00 p.m. in MPS room 1200.
Xin’s talk is titled “Creating Optimized and Robust Photosynthesis in Cyanobacteria”. We would like to invite graduate students and postdocs to join the speaker for a lunch and discussion. Lunch will be provided at 12:00 p.m. in PLB 168. This is a great opportunity to meet our outside speaker in an informal environment. If you would like to participate in the luncheon, please RSVP to Keri Morris (morrisk@msu.edu) with any dietary restrictions by Friday September 15, 2023 at noon. All students and post docs who are interested in this week’s seminar topic are welcome to attend. You do not need to be in the MPS program or affiliated with an MPS faculty member.
Responsible and Ethical Conduct of Research (RECR) Training
Recent Functional Updates to the RECR page in SIS have gone into effect. During this webinar, the Graduate School’s SIS team will present information on the RECR page updates, basic RECR requirements, how students should fulfill the requirements, and staff responsibilities regarding RECR. Attendees of this training will have the opportunity to join a drop-in session on September 21. Learn more and register here.
Graduate School Write-In
Write-ins are hosted and facilitated to provide writers with an opportunity to write in a shared writing space where other writers are present, and a writing center consultant/staff member is present to provide consultations for writers who would like to have a consultation appointment during the session. Learn more and register here.
Check out the Library with COGS!
Join us for a fun and informative look at the bounty of resources on 2-West Main Library! Includes interactive tour of 360 and VR Rooms, Makerspace (including 3-D Printing services and Makecentral publishing services. Learn how you can get help with your research and other projects, while exploring and connecting with other graduate students. Please register on the COGS event website linked here!
Lunch with the Dean
The Dean of the Graduate School, Pero Dagbovie, invites graduate students to join him and his graduate school colleagues for lunch and conversation in Chittenden Hall along the beautiful and historic Laboratory Row. This unique opportunity allows Graduate Students the chance to connect with the Graduate School leadership and staff in a relaxed and informal lunch setting. Connect about career and school journeys, gain understanding of The Graduate School programs that empower graduate student success and engage in candid discussions about university and student life. Learn more and register here.
Writing a Research Statement: Where will your research program go in the future?
Writing an effective research statement is an important first step to move you from being an "applicant" to an "interviewee". During this session, participants will engage in a discussion about strategies for preparing an effective research statement that leverages your experiences and demonstrates your potential. Learn more and register here.
Graduate Research Fellowship Program Workshop Series
The MSU AGEP Program is conducting a workshop series that will present NSF GRFP program information and provide structured practice to create competitive GRFP application. Students will participate in a 5-part series that will include an overview of the GRFP and application process, first-hand advice from GRFP reviewers and recent awardees, and two interactive sessions to review and revise their application documents. Learn more and register here.
Awards, Grants and Fellowships
Shari VanDelinder Endowed Fellowship
The Shari VanDelinder Endowed Fellowship has been established to further research and knowledge in the areas of autism, schizophrenia, bipolar disorder, chronic traumatic encephalopathy (CTE) or Alzheimer's. Recipients shall be pursuing a graduate degree at Michigan State University with an area of study/research in autism, schizophrenia, bipolar disorder, chronic traumatic encephalopathy (CTE) or Alzheimer's. Learn more and apply here.
Dr. Karen Klomparens Endowment in Support of Graduate Fellowships
This fellowship is awarded in honor of Dr. Karen Klomparens, Dean of the Graduate School and Associate Provost for Graduate Education at MSU from 1997 until 2014, in honor of her unwavering commitment to graduate education. Applicants should be enrolled in masters or doctoral programs at MSU in any discipline including professional degree programs. Learn more and apply here.
Announcements
MSU Food Bank
Eligible to undergraduates, graduates, and professional students enrolled in Fall/Spring semester and without a dining plan. Fruits, soups, pasta, rice, protein, cereal, bread, and fresh produce available year-round! To learn more about visiting the MSU Foodbank, or to donate, visit here.
Biology on Tap Speakers Wanted!
BoT is a monthly community outreach event during which two scientists give 15–20-minute non-technical talks on topics in biology to the public at a local pub. In addition to engaging in the presentations, the audience can participate in trivia related to the talks for a chance to win prizes! 2023-2024 BoT will be held at Michigan Wildlife Conservancy's Wildlife Pub on the first Thursday of each month at 7 PM, starting in October. That said, we are currently looking for speakers! Talks can be about any topic in biology that interests you and we will work to pair speakers together under a common theme. Scientists at any stage in their career are encouraged to speak. Learn more and register here.
BioRender Software Now Available at a University Rate
BioRender is a cutting-edge, scientific graphic software designed to revolutionize the way the scholars communicate their research findings. Many faculty and students across the MSU research community are already using this exciting tool and have found great value in it. The Office of Research and Innovation is excited to offer BioRender at the subsidized rate of $100 per year, providing faculty and students with an affordable solution to create stunning, publication-quality graphics that effectively convey complex scientific concepts. Learn more here.
Welcome Information for International Graduate Students
International graduate students for the upcoming Fall 2023 semester will need to complete various tasks and attend events prior to the start of the semester. A list of these action items can be found here.
COVID-19 Guidance for International Travel
To help field questions, Global Safety has developed a guide with recommended steps and resources. This is available as a PDF and on the Global Safety website at www.globalsafety.msu.edu/positive-COVID-19. The first step is to call ISOS for guidance.
Job Postings
Research Associate, Fixed Term — Balbach Lab
A Postdoctoral Research Associate position is available in the laboratory of Melanie Balbach in the Department of Biochemistry and Molecular Biology. The Research Associate will focus on the metabolic changes and underlying regulatory pathways in the male germ cell during activation and during zygote development. Opportunities for professional development include participation in grant proposal writing, attending and presenting at scientific research symposiums and conferences, networking with other scientists within and outside MSU as well as mentoring of undergraduate and graduate students. Learn more about this MSU Careers posting and apply at this link.
Undergraduate Researcher — Rhee Lab
The Rhee lab is hiring undergraduate researchers to investigate plant adaptive strategies to extreme environmental conditions such as drought and heat stress. We focus on metabolic traits at multiple scales including individual genes, pathways, and networks. Current work would assist in growing, genotyping, and transforming plants; developing phenotypic assays for plant growth and seed germination; live cell imaging and microscopy; data collection and analysis; and media preparation. This position has the potential for multi-year, part-time employment in the Rhee lab as well as the possibility to develop your own research projects. If interested, please send a description of how your interests align with our lab, your resume, and your availability to Sterling Field (fieldst4@msu.edu).
Assistant Professor in Molecular Biology, Tenure Track — Colgate University
The Department of Biology at Colgate University invites applications for a tenure-stream position in molecular biology at the rank of Assistant Professor beginning fall semester 2024. The successful candidate will join a biology faculty committed to innovative teaching and undergraduate-accessible research in a liberal-arts setting. The successful candidate is expected to develop a productive independent research program in molecular biology or genetics with a preference for laboratory-based research. The individual hired will team teach in a foundations course called Molecules, Cells, and Genes; elective courses in molecular biology or genetics; and a senior research tutorial in their area of interest. Learn more and apply here.
Graduate Assistant — Faculty and Academic Staff Development
The Office of Faculty and Academic Staff Development (FASD) is seeking a creative and innovative graduate student to help with data collection and benchmarking in support of our current work portfolio, as well as conducting landscape analysis to inform proposals related to MSU’s Strategic Plan. This half-time assistantship will require 20 hours per week and comes with a stipend, tuition reimbursement, and health insurance. Work hours are typically spread across weekdays between 9 a.m. and 5 p.m. Some work will be done in person (e.g. support, staff meetings), and some of the work can be done remotely. The position runs through May 15, 2024. Learn more and apply here.
Recent Publications
Arias, C. L., García Navarrete, L. T., Mukundi, E., Swanson, T., Yang, F., Hernandez,
J., Grotewold, E., & Alonso, A. P. (2023). Metabolic
and transcriptomic study of pennycress natural variation identifies targets for oil
improvement. Plant biotechnology journal, 21(9), 1887–1903 https://doi.org/10.1111/pbi.14101
Boger, B. L., Manfredi, J. M., Loucks, A. R., Salamey, M. Z., Kapeller, L. E., Fricano,
A. G., Winkler, A., Yob, C., & Colbath, A. C. (2023).
Intra-articular triamcinolone acetonide injection results in increases in systemic
insulin and glucose concentrations in horses without insulin dysregulation. Equine veterinary journal, 10.1111/evj.14003. Advance online publication. https://doi.org/10.1111/evj.14003
Chen, J., Woldring, D. R., Huang, F., Huang, X., & Wei, G. W. (2023). Topological
deep learning based deep mutational scanning.
Computers in biology and medicine, 164, 107258. https://doi.org/10.1016/j.compbiomed.2023.107258
Feng, H., Wang, R., Zhan, C. G., & Wei, G. W. (2023). Multiobjective Molecular Optimization
for Opioid Use Disorder Treatment Using
Generative Network Complex. Journal of medicinal chemistry, 66(17), 12479–12498. https://doi.org/10.1021/acs.jmedchem.3c01053
Heyza, J. R., Mikhova, M., & Schmidt, J. C. (2023). Live cell single-molecule imaging
to study DNA repair in human cells. DNA repair,
129, 103540. https://doi.org/10.1016/j.dnarep.2023.103540
Johnson, L. Y. D., Major, I. T., Chen, Y., Yang, C., Vanegas-Cano, L. J., & Howe,
G. A. (2023). Diversification of JAZ-MYC signaling function
in immune metabolism. The New phytologist, 239(6), 2277–2291. https://doi.org/10.1111/nph.19114
Khatri, K., O'Malley, A., Linn, C., Kowal, K., & Chruszcz, M. (2023). Role of Small
Molecule Ligands in IgE-Mediated Allergy. Current allergy
and asthma reports, 23(9), 497–508. https://doi.org/10.1007/s11882-023-01100-2
Kulke, M., Olson, D. M., Huang, J., Kramer, D. M., & Vermaas, J. V. (2023). Long-Range
Electron Transport Rates Depend on Wire
Dimensions in Cytochrome Nanowires. Small (Weinheim an der Bergstrasse, Germany), e2304013. Advance online publication. https://doi.org/10.1002/smll.202304013
Li, X., Chou, M. Y., Bonito, G. M., & Last, R. L. (2023). Anti-fungal bioactive terpenoids
in the bioenergy crop switchgrass (Panicum virgatum)
may contribute to ecotype-specific microbiome composition. Communications biology, 6(1), 917. https://doi.org/10.1038/s42003-023-05290-3
Sarkar, D., Lee, H., Vant, J. W., Turilli, M., Vermaas, J. V., Jha, S., & Singharoy,
A. (2023). Adaptive Ensemble Refinement of Protein
Structures in High Resolution Electron Microscopy Density Maps with Radical Augmented
Molecular Dynamics Flexible Fitting. Journal of chemical information and modeling, 10.1021/acs.jcim.3c00350. Advance online publication. https://doi.org/10.1021/acs.jcim.3c00350
Sharaf, A., Ndiribe, C. C., Omotoriogun, T. C., Abueg, L., Badaoui, B., Badiane Markey,
F. J., Beedessee, G., Diouf, D., Duru, V. C., Ebuzome,
C., Eziuzor, S. C., Jaufeerally Fakim, Y., Formenti, G., Ghanmi, N., Guerfali, F.
Z., Houaga, I., Ideozu, J. E., Katee, S. M., Khayi, S., Kuja, J. O., … Ebenezer, T. E. (2023). Bridging the gap in African biodiversity genomics and bioinformatics. Nature biotechnology, 41(9), 1348–1354. https://doi.org/10.1038/s41587-023-01933-2
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